PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun009900
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family TCP
Protein Properties Length: 213aa    MW: 23420.8 Da    PI: 10.0213
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-22759PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP132.83.2e-4173171298
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa.ksk 98 
                ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s +++ +s+  +++
  Vun009900  73 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPSQLRSSYfNPN 171
                789******************************************************************999878888888886666644443333333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.0E-4077204IPR005333Transcription factor, TCP
PROSITE profilePS5136927.92379133IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MEGGDDLHHH HHHHRQNFPF QLLEKKEDQE AASCSTSSPY PSLAISAEPS TSNSTRSNQL  60
AAPSEPPNSK KPPPKRTSTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL GHKSDGETIE  120
WLLQQAEPAV IAATGTGTIP ANFTSLNISL RSSGSSMSVP SQLRSSYFNP NFSLQQRRTL  180
FPGIALSSDN NPTNTSTLLN FQSNNLNTSM LQX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014510536.11e-131PREDICTED: transcription factor TCP14-like
RefseqXP_014510534.11e-131PREDICTED: transcription factor TCP14-like
RefseqXP_014510533.11e-131PREDICTED: transcription factor TCP14-like
SwissprotQ9C9L22e-54TCP15_ARATH; Transcription factor TCP15
TrEMBLA0A0L9TSX01e-128A0A0L9TSX0_PHAAN; Uncharacterized protein
TrEMBLA0A0S3R7V11e-128A0A0S3R7V1_PHAAN; Uncharacterized protein
STRINGGLYMA05G01131.11e-111(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.13e-41TCP family protein